Butyrivibrio fibrisolvens D1 (Bryant and Small 1956) genome sequencing - SRA

SRX23834892: Butyrivibrio fibrisolvens D1 (Bryant and Small 1956) genome sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 6.7M spots, 2G bases, 536.6Mb downloads

Design: The starting material is DNA (100 ~ 1000ng) passed quality control. DNA is fragmented by acoustic disruption using Covaris S220 and then undergoes end repair, dA-tailing, adapter ligation and purification. The purified DNA is further selected for the right size before PCR amplification for library construction. The preliminary quantification and dilution of the library is performed using Qubit3.0, and then Agilent 2100 was used to determine the insert size and nucleic acid concentration of the resulting library sample. The effective concentration of each sample library in the library mixture is determined by qPCR before sequencing to ensure the accuracy of the sample concentration and the reliability of the sequencing data.

Submitted by: AgResearch Ltd.

Study: Butyrivibrio fibrisolvens type strain D1 (ATCC 19171, DSM 3071) complete genome

PRJNA1083737 • SRP493333 • All experiments • All runs

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The anaerobic butyrate-producing bacterium Butyrivibrio fibrisolvens D1T (ATCC 19171, DSM 3071, Bryant and Small, 1956) was isolated from the bovine rumen and is the type species of the genus Butyrivibrio within the family Lachnospiraceae. B. fibrisolvens D1T is able to ferment a wide range of carbohydrates including xylan, pectin and starch with the production of hydrogen, carbon dioxide, butyrate, formate and lactate.

Sample:

SAMN40258195 • SRS20655817 • All experiments • All runs

Organism: Butyrivibrio fibrisolvens

Library:

Name: D1_illumina

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: GENOMIC

Selection: size fractionation

Layout: PAIRED

Runs: 1 run, 6.7M spots, 2G bases, 536.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR28223539	6,695,465	2G	536.6Mb	2024-03-05

ID:: 32136873

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